{
  "schemaVersion": 1,
  "slug": "smaht",
  "name": "smaht",
  "description": "Search and download SMaHT somatic mosaicism data — somatic variant calls, WGS and RNA-seq reads, and the donors, tissues and assays behind them. Walks donor to tissue to library to file and checks each file's tier before transferring. Cell-line benchmarking data is open with no account; every file from human tissue is protected under dbGaP, a route this skill describes rather than opens.",
  "category": "data",
  "version": "1.0.0",
  "author": "Heureka Labs",
  "license": "CC-BY-4.0",
  "tags": [
    "smaht",
    "somatic-mosaicism",
    "public-data",
    "controlled-access",
    "dbgap"
  ],
  "covers": [
    "somatic mosaicism",
    "somatic mutation",
    "mosaicism",
    "post-mortem tissue",
    "colo829",
    "hapmap",
    "whole genome sequencing",
    "wgs",
    "rna-seq",
    "kinnex",
    "duplex sequencing",
    "nanoseq",
    "codec",
    "hidef-seq",
    "fiber-seq",
    "single-cell wgs",
    "pta",
    "tencats",
    "retrotransposon",
    "mobile element insertion",
    "snv",
    "indel",
    "cram",
    "vcf",
    "brain",
    "liver",
    "lung",
    "colon",
    "skin",
    "human"
  ],
  "papers": [
    "PMID:40604182",
    "PMID:41279200",
    "doi:10.1101/2025.10.13.681545",
    "doi:10.1101/2025.10.07.680917"
  ],
  "access": [
    "open",
    "registered",
    "controlled"
  ],
  "platform": "snovault",
  "updatedAt": "2026-08-27T21:32:44-04:00",
  "source": {
    "repo": "heurekalabsco/heurekaskills",
    "commit": "7e1bad52ac05e02b76eed1a698c07509c64119b5",
    "path": "skills/smaht"
  },
  "checksum": "sha256:81961b73eb912722e164b58aca1685082a9c3244b95d1a2f2374d728a660fd2c",
  "signals": null,
  "files": [
    {
      "path": "SKILL.md",
      "url": "https://heurekaskills.com/smaht/files/SKILL.md",
      "size": 65271,
      "sha256": "038978c292b1fac50db63e9597b529108238622be1e5b17b4b3aee3120ce50b7"
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  ]
}