{
  "schemaVersion": 1,
  "slug": "pride",
  "name": "pride",
  "description": "Search the PRIDE Archive at EMBL-EBI for public mass-spectrometry proteomics datasets by keyword, organism, tissue, disease, instrument or software — read the free-text sample and data processing protocols, tell COMPLETE from PARTIAL submissions, and download raw, mzML, mzIdentML and search-engine output with checksums.",
  "category": "data",
  "version": "1.1.0",
  "author": "Heureka Labs",
  "license": "CC-BY-4.0",
  "tags": [
    "proteomics",
    "mass-spectrometry",
    "pride",
    "public-data",
    "multi-omics"
  ],
  "covers": [
    "proteomics",
    "proteome",
    "mass spectrometry",
    "phosphoproteomics",
    "lipidomics",
    "immunopeptidomics",
    "LC-MS/MS",
    "shotgun proteomics",
    "data-independent acquisition",
    "TMT",
    "SILAC",
    "label-free",
    "mzML",
    "mzIdentML",
    "mzTab",
    "Orbitrap",
    "timsTOF",
    "MaxQuant",
    "DIA-NN",
    "PXD",
    "ProteomeXchange",
    "liver",
    "heart",
    "blood plasma",
    "kidney",
    "brain",
    "human",
    "mouse",
    "hepatocellular carcinoma",
    "aging"
  ],
  "papers": [
    "PMID:39494541",
    "PMID:34723319",
    "PMID:36370099",
    "PMID:20716697",
    "PMID:40915658"
  ],
  "access": [
    "open"
  ],
  "updatedAt": "2026-08-19T12:47:41-04:00",
  "source": {
    "repo": "heurekalabsco/heurekaskills",
    "commit": "6bc57243f56e10da0507a49e08a5e90d4b3f3cd4",
    "path": "skills/pride"
  },
  "checksum": "sha256:d2765673c751396e26b49c94d14705d6dd132cfcfd78cf665247f7c5492c9fe5",
  "signals": null,
  "files": [
    {
      "path": "SKILL.md",
      "url": "https://heurekaskills.com/pride/files/SKILL.md",
      "size": 74232,
      "sha256": "cabdea4d0b4a19d03cf2d8d4cebc8aa1310d1d0dbf1817f452ca5504c686d73a"
    }
  ]
}