{
  "schemaVersion": 1,
  "slug": "codex-phenocycler",
  "name": "codex-phenocycler",
  "description": "Take a CODEX or PhenoCycler image from pixels to a cell-by-marker table — choosing segmentation channels, running Cellpose over a multiplex stack, measuring per-cell intensity in micrometres, and building the AnnData that spatial analysis starts from. Includes the licence and token gates on the tools this workflow is usually built with.",
  "category": "analysis",
  "version": "1.0.0",
  "author": "Heureka Labs",
  "license": "CC-BY-4.0",
  "tags": [
    "microscopy",
    "multiplex-imaging",
    "segmentation",
    "spatial",
    "single-cell"
  ],
  "updatedAt": "2026-08-26T10:31:58-04:00",
  "source": {
    "repo": "heurekalabsco/heurekaskills",
    "commit": "6bc57243f56e10da0507a49e08a5e90d4b3f3cd4",
    "path": "skills/codex-phenocycler"
  },
  "checksum": "sha256:b1745a8d413a2cef645f9aa3a04de082038e43374220926732d055f375b80720",
  "signals": null,
  "files": [
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      "path": "SKILL.md",
      "url": "https://heurekaskills.com/codex-phenocycler/files/SKILL.md",
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}